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What are Payroll Taxes and How to Calculate?

Updated on: 24th Jul 2025

6 mins read

Payroll Taxes Explained

Payroll processing in India is not just about issuing cheques. It is about achieving the right result, meeting the law requirements, and employees’ confidence. Payroll taxes have become one of the most crucial issues due to new legal regulations and the increasing use of automated systems in companies.

However, concepts such as TDS, ESI, or PF sound complicated irrespective of the fact that the laws governing such fields evolve and there are endless questions from employees. One payroll mistake can result in penalties, loss of confidence, or trust from your employees. That is why decoding the payroll taxes cannot be avoided, it is compulsory today.

This blog takes you to what payroll taxes are and how to calculate them—no fluff, only truth.

What are Payroll Taxes in India?

The payroll taxes India means the deductions on an employee’s salary, and the contributions by the employer to meet the social security and tax requirements in India. These are crucial for the management of national schemes like pensions, health insurance, and income tax amongst others.

Key Payroll Tax Components:

  • TDS (Tax Deducted at Source): It is the income tax amount deducted from an employee’s salary as per the income tax rate or slab plan. It is paid to the Income Tax Department.
  • EPF (Employees’ Provident Fund): This is a savings scheme whereby the employees and the employer make some contributions from the monthly salary.
  • Employees’ State Insurance (ESI): This scheme provides medical facilities to the employees and their families. It is required for the employees whose salary is up to ₹21,000 per month.
  • PT (Professional Tax): A direct tax levied by the state on the professionals and salaried employees. However, the tax rate and rules may differ from one state to another.

These taxes also serve the statutory requirements and are valuable for the long-term needs of companies and employees, such as saving for retirement, getting health insurance, and tax incentives.

Why Should HR Professionals Ensure Accurate Payroll Taxes?

The difficult job of processing payroll is not just about handling finances, it also engages the trust of the workforce and the legal requirements of organizations. Lack of accuracy in deductions or delayed deposits can result in negative consequences such as:

  • Heavy penalties: Where EPF, ESI, or TDS is not deposited within the due dates, there are penalties and rates of interest.
  • Employee dissatisfaction: Incorrect or unexplained deductions break trust in the employer.
  • Legal issues: Another important aspect of payroll is legal issues since it draws most of the attention during audits.

Why is it Important to Prioritize Payroll Tax Management?

  • Establishes credibility: Employees are assured by observing the right taxation procedures.
  • Saves time: This eliminates time and incidences of errors or increased loads.
  • Facilitates easy audits: Field management of payroll taxes makes it easier for the HR department during statutory audits.
  • Improves employee satisfaction: Clear salary statements and tax deductions make employees trust the organization.
  • Strengthens employer brand: An efficient and equitable payroll taxation system helps to attract skilled employees.
  • Reduces attrition risk: Employees want job security, and processing accurate payroll taxes is a major factor in retaining employees.

How to Calculate Payroll Taxes in India

Learning how to calculate payroll taxes is another vital duty of the HR departments across organizations. Here is the breakdown of payroll tax calculation, criteria and deadlines.

1. TDS (Tax Deducted at Source)

TDS ensures that income tax is paid at source through employees’ salaries, thereby no end-of-the-year tax is incurred. It means that for HR to implement the correct slab rates and make relevant exemptions on monthly deductions, they should call for this plan.

  • Who Pays: Employee (deducted and deposited by employer)
  • Calculation: Based on annual income minus applicable deductions (e.g., HRA, 80C, 80D)
  • Rate: As per IT slabs
  • Due Date: 7th of the next month

Example: As per the old regime, for an annual CTC of ₹6,00,000, after exemptions under 80C (₹1.5 lakh), taxable income becomes ₹4.5 lakh. TDS is calculated monthly as per the applicable tax slab.

2. EPF (Employees’ Provident Fund)

EPF is a mandatory saving scheme that provides adequate retirement saving funds to employees for poverty minimization upon their retirement. HR needs to ensure contributions are computed accurately as the error may lead to employees’ complaints and compliance concerns.

  • Who Pays: Both employer and employee
  • Employee Share: 12% of (Basic + DA)
  • Employer Share: 12% (8.33% to Pension Scheme, 3.67% to EPF)
  • Due Date: 15th of the following month

Note: As per the Superworks report, companies with automated EPF calculations saw a 38% drop in payroll errors.

3. ESI (Employees’ State Insurance)

ESI is a mandatory employer contribution in that it offers health and cash benefits for any employee earning up to a specific amount of salary. This is why it is important for HR to check the eligible employees and make deposits in time to avoid any breaks in coverage.

  • Who Pays: Both employer and employee
  • Eligibility: Salary ≤ ₹21,000
  • Employee Share: 0.75% of gross salary
  • Employer Share: 3.25% of gross salary
  • Due Date: 15th of the following month

Example: Gross salary = ₹20,000

  • The employee contributes ₹150
  • Employer contributes ₹650

Note: Organisations automating ESI compliance experienced a 24% increase in employee satisfaction, as reported by Superworks.

4. PT (Professional Tax)

Professional Tax is a minor, obligatory payment that differs in some states in terms of tax rate and is paid every month. HR teams should follow state-wise rules to avoid fines and make complaints with all the regulations. Although PT is a small deduction, failure to meet the compliance deadlines can lead to serious penalties.

  • Who Pays: Employee (collected and paid by employer)
  • Rate: Varies by state
  • Due Date: Monthly or annually, depending on state

Did You Know? 67% of Indian companies adopted payroll automation by 2024, projected to grow to 85% by 2025.

4 Tips for Seamless Payroll Tax Management

Here is an outline of payroll taxation tips that give HR leaders a heads-up:

  • Keep track: Follow changes on sites of EPFO, ESIC, Income Tax, and the state’s PT to stay updated.
  • Take advantage of the available digital tools: Modern HRMS has a feature of automating deductions, filing, and payments.
  • Communicate effectively: Provide a detailed description of how the salary is split and why deductions are made.
  • Record Book: Preserve records of challans, returns, and reports.

Wrapping Up

The Indian payroll taxes are not just deductions that are simply made by employers from their employees’ salaries. For HR professionals, payroll taxation represents accountability, openness, and employee management. From managing your TDS and explaining the various PT slabs to submitting PF on time, the HR team’s role is functional. Make sure your organization does not fall under legal issues while at the same time promoting the welfare of employees.

Thus, an efficient, equipped, and timely functioning HR department is your biggest strength in payroll tax management.

Gaurav Puri

Head of Finance & Accounts at Uneecops Workplace Solutions Pvt. Ltd.

Gaurav Puri is the Associate Director of Finance at Uneecops Workplace Solutions Pvt. Ltd. An alumnus of The Institute of the Chartered Accountants of India, he brings over more than two decades of finance expertise in Accounts & Finance, Auditing, ERP Implementations, and Restructuring & Turnaround services. He is known for leading finance teams with clarity and strategy, turning numbers into decisions that deliver business impact.

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